Yes, that orientation is correct. The door pillar has the vertical ridge and the back side of the strike plate has a horizontal ridge. But, the horizontal serrations cover the entire side. This photo Brad posted looks a lot like the shims on my truck.
http://www.flickr.com/photos/advance-design_parts_co/8129436365/in/set-72157631868452754/
The vertical serrations are the ones that only cover the center 9/16th inch.

Since it sounds like you are getting the doors in tip top working order do you already know about this little shim kit?
http://www.dreamershotrods.com/search.aspx?find=Door+latch+shims
It did wonders for me. I think they are available from most of the usual vendors. I only give you the Dreamer's link since they are local and familiar to me.

Best of luck to you.