Russ,
I aligned my doors before installing the rubber.They were absolutely perfect, then when I added the weatherstripping my door bottoms stuck out about a 1/4"Needless to say I was very unhappy , but I left the doors shut for about a week and they are slowly seating themselves again without adjustment.Personally I think I still would of done it the same way if I did again!!
Good luck to ya.Just my 2cents worth.
Alan
